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CLUSTAL W (1.81) multiple sequence alignment HTLV-I TPVLQLS-PAELHSFTHCGQTALT-----------LQGATTTE-ASNILRSCHACR-GGN HTLV-II APLVPLT-PQGLHGLTHCNQRALV-----------SFGATPRE-AKSLVQTCHTCQ-TIN BLV -QLLPLETPEQWHKLTHCNSRALSRW--------PNPRISAWD-PRSPATLCETCQ-KLN MULV -DQFTFELLDFLHQLTHLSFSKMKALLER-SHSPYYMLNRDRTL-KNITETCKACAQVNA SRV-1 -INTNLESAQNAHTLHHLNAQTLK-----------LMFNIPREQARQIVRQCPICA---T SMRV -ISDPIHEATQAHTLHHLNAHTLR-----------LLYKITREQARDIVKACKQCV---V MMTV -ILTALESAQESHALHHQNAAALR-----------FQFHITREQAREIVKLCPNCP---D IAP -LSTHAQAAKEFHKRFHVTAETLR-----------RRFALSRKEAREIVTQCQNCC---E RSV -QAYPLREAKDLHTALHIGPRALS-----------KACNISMQQAREVVQTCPHCN---- HTLV-III -FLDGIDKAQDEHEKYHSNWRAMA-----------SDFNLPPVVAKEIVASCDKCQ---- EIAV -WVENIQEAQDEHENWHTSPKILA-----------RNYKIPLTVAKQITQECPHCT---- VISNA -WIENIPLAEEEHNKWHQDAVSLH-----------LEFGIPRTAAEDIVQQCDVCQ--EN * * : . * * HTLV-I PQHQMPRGHIRRGLLPNHIWQGDITHFKY-KNTLYRLHVWVDTFSGAISATQKRKETSSE HTLV-II SQHHMPRGYIRRGLLPNHIWQGDVTHYKY-KKYKYCLHVWVDTFSGAVSVSCKKKETSCE BLV PTGGGKMRTIQRGWAPNHIWQADITHYKY-KQFTYALHVFVDTYSGATHASAKRGLTTQT MULV SKSAVKQGTRVRGHRPGTHWEIDFTEIKPGLYGYKYLLVFIDTFSGWIEAFPTKKETAKV SRV-1 YLPVPHLGVNPRGLLPNMIWQMDVTHYSE-FGNLKYIHVSIDTFSGFLLATLQTGETTKH SMRV ATPVPHLGVNPRGLVPNAIWQMDVTHFTP-FGKQRFVHVTVDTFSGFILATPQTGEASKN MMTV WGSAPQLGVNPRGLKPRVLWQMDVTHVSE-FGKLKYVHVTVDTYSHFTFATARTGEATKD IAP FLPTPHMGINPRGIRPLQMWQMDVTHIPS-FGRLQYVHVSVDTCSGVMFATPLTGEKASY RSV SAPALEAGVNPRGLGPLQIWQTDFTLEPR-MAPRSWLAVTVDTASSAIVVTQHGRVTSVA HTLV-III LKGEAMHGQVDCSP---GIWQLDCTHLE-----GKVILVAVHVASGYIEAEVIPAETGQE EIAV KQGSGPAGCVMRSP---NHWQADCTHLD-----NKIILHFVESNSGYIHATLLSKENALC VISNA KMPSTLRGSNKRGI---DHWQVDYTHYE-----DKIILVWVETNSGLIYAERVKGETGQE . *: * * : :. * . HTLV-I AISSLL-QAIAHLGKPSYINTDNGPAYISQDFLNMCTSLAIRHTTHVPYNPTSSGLVERS HTLV-II TISAVL-QAISLLGKPLHINTDNGPAFLSQEFQEFCTSYRIKHSTHIPYNPTSSGLVERT BLV TIEGLL-EAIVHLGRPKKLNTDQGANYTSKTFVRFCQQFGVSLSHHVPYNPTSSGLDERT MULV VTKKLLEEIFPRFGMPQVLGTDNGPAFVSKVSQTVADLLGIDWKLHCAYRPQSSGQVERM SRV-1 VITHLL-HCFSIIGLPKQIKTDNGPGYTSKNFQEFCSTLQIKHVTGIPYNPQGQGIVERA SMRV VISHVI-HCLATIGKPHTIKTDNGPGYTGKNFQDFCQKLQIKHVTGIPYNPQGQGVVERA MMTV VLQHLA-QSFAYMGIPQKIKTDNAPAYVSRSIQEFLARWKISHVTGIPYNPQGQAIVERT IAP VIQHCL-EAWSAWGKPRIXKTDNGPAYTSQKFRQFCRQMDVTHLTGLPYNPQGQGIVERA RSV VQHHWA-TAIAVLGRPKAIKTDNGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERA HTLV-III TAYFLL--KLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESM EIAV TSLAIL--EWARLFSPKSLHTDNGTNFVAEPVVNLLKFLKIAHTTGIPYHPESQGIVERA VISNA FRVQTM--KWYAMFAPKSLQSDNGPAFVAESTQLLMKYLGIEHTTGIPWNPQSQALVERT :*:.. : . : . .. ... * HTLV-I NGILKTLLYKYFTDKPD- HTLV-II NGVIKNLLNKYLLDCPN- BLV NGLLKLLLSKYHLDEPH- MULV NRTIKETLTKLTLATGS- SRV-1 HLSLKTTIEK-IKKGEW- SMRV HQTLKNALNR-LARSPLG MMTV HQNIKAQLNKLQKAGKY- IAP HRTLKSYLIK-QKGSIE- RSV NRLLKDRIRVLAEGDGF- HTLV-III NKELKKIIGQVRDQAEH- EIAV NRTLKEKIQSHRDNTQT- VISNA HQTLKNTLEKLIPMFNA- : :* :
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