extractCD
(search and
extract
partial sequence of
C
onserved
D
omain)
ver. 2008Dec08
Input query protein sequence in fasta format
Sequence:
protein
nucleotide
E-value
Cover Ratio
%
Report related sequence up to
sequences
Clear all
See sample
to Japanese page
CDsearch performs
RPS-BLAST
search against NCBI CDD database. Subsequences of the top hit region for each of the input sequence will be extracted.
*
RPS-BLAST
:
ftp://ftp.ncbi.nih.gov/blast/documents/rpsblast.html
, see also
http://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml