Ondemand Mapping
Result ID=
Input nucleotide sequence in (multi-)fasta format
>gi|14456711|ref|NM_000558.3| Homo sapiens hemoglobin, alpha 1 (HBA1), mRNA ACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTC AAGGCCGCCTGGGGTAAGGTCGGCGCGCACGCTGGCGAGTATGGTGCGGAGGCCCTGGAGAGGATGTTCC TGTCCTTCCCCACCACCAAGACCTACTTCCCGCACTTCGACCTGAGCCACGGCTCTGCCCAGGTTAAGGG CCACGGCAAGAAGGTGGCCGACGCGCTGACCAACGCCGTGGCGCACGTGGACGACATGCCCAACGCGCTG TCCGCCCTGAGCGACCTGCACGCGCACAAGCTTCGGGTGGACCCGGTCAACTTCAAGCTCCTAAGCCACT GCCTGCTGGTGACCCTGGCCGCCCACCTCCCCGCCGAGTTCACCCCTGCGGTGCACGCCTCCCTGGACAA GTTCCTGGCTTCTGTGAGCACCGTGCTGACCTCCAAATACCGTTAAGCTGGAGCCTCGGTGGCCATGCTT CTTGCCCCTTGGGCCTCCCCCCAGCCCCTCCTCCCCTTCCTGCACCCGTACCCCCGTGGTCTTTGAATAA AGTCTGAGTGGGCGGC
Algorithm
SIM4:
BLAT (
NOTICE! BLAT is NEWLY AVAIABLE, but is NOT YET TUNED well for this web service
):
BLAST search option:
E-value:
filter
gap
use megablast
Genome
Human (UCSC hg18)
Chimpanzee (UCSC panTro2)
Rhesus (UCSC rheMac2)
Mouse (UCSC mm8)
Ornithorhynchus (NCBI build1.1)
Chicken (NCBI build2.1)
Zebrafish (NCBI Zv6)
Honeybee (NCBI Amel4.0)
Sea Urchin (NCBI Spurv2.1)
Nematode(NCBI WS170)
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